Welcome to bistro’s documentation!

• Getting started
  • Installation
  • A simple example
  • Running a pipeline
• OCaml primer
  • Getting started with the OCaml interpreter
  • Functions
• Basics: how to write pipelines
  • What’s in bistro
  • A tiny QC pipeline
• How to wrap new tools
  • A (very) basic example
  • Parameterizing workflows
  • Depending on others
  • Utility functions to describe a command’s arguments
  • Typing workflows
• Installing Docker
  • Debian